Articles with "shotgun based" as a keyword



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HiFine: integrating Hi-C-based and shotgun-based methods to refine binning of metagenomic contigs

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Published in 2022 at "Bioinformatics"

DOI: 10.1093/bioinformatics/btac295

Abstract: MOTIVATION Metagenomic binning aims to retrieve microbial genomes directly from ecosystems by clustering metagenomic contigs assembled from short reads into draft genomic bins. Traditional shotgun-based binning methods depend on the contigs' composition and abundance profiles… read more here.

Keywords: binning methods; shotgun based; metagenomic contigs; refine binning ... See more keywords