Corrigendum: Shotgun metagenomics, from sampling to analysis
Sign Up to like & getrecommendations! Published in 2017 at "Nature Biotechnology"
DOI: 10.1038/nbt1217-1211b
Abstract: This corrects the article DOI: 10.1038/nbt.3935 read more here.
Keywords: corrigendum shotgun; sampling analysis; shotgun metagenomics; metagenomics sampling ... See more keywords
Shotgun metagenomics reveal a diverse assemblage of protists in a model Antarctic soil ecosystem.
Sign Up to like & getrecommendations! Published in 2020 at "Environmental microbiology"
DOI: 10.1111/1462-2920.15198
Abstract: The soils of the McMurdo Dry Valleys (MDV) of Antarctica are established models for understanding fundamental processes in soil ecosystem functioning (e.g. ecological tipping points, community structuring, and nutrient cycling) because the extreme physical environment… read more here.
Keywords: ecosystem; soil ecosystem; biodiversity; soil ... See more keywords
Genotype by sequencing: An alternative new method to amplicon metabarcoding and shotgun metagenomics for the assessment of eukaryote biodiversity
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DOI: 10.1111/1755-0998.13320
Abstract: The use of highâthroughput DNA sequencing (HTS) has revolutionized the assessment of biodiversity in plant and animal communities. There are two main approaches to estimate the identity and the relative species abundance (RSA) in complex… read more here.
Keywords: metabarcoding shotgun; new method; biodiversity; shotgun metagenomics ... See more keywords
Shotgun Metagenomics Of Dust Microbiome From Flight Deck And Cabin In Civil Aviation Aircraft.
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DOI: 10.1111/ina.12707
Abstract: Microbial exposureisrelated to the health of passengers on commercial aircraft, but nostudies characterizedthe microbial compositionat the species level and identified their ecological determinants. We collected vacuum dust from floor and seatsurfaces in flight decks and… read more here.
Keywords: aircraft; flight; dust microbiome; metagenomics dust ... See more keywords
Shotgun metagenomics of fecal samples from children in Peru reveals frequent complex co-infections with multiple Campylobacter species
Sign Up to like & getrecommendations! Published in 2022 at "PLoS Neglected Tropical Diseases"
DOI: 10.1371/journal.pntd.0010815
Abstract: Campylobacter spp. are a major cause of bacterial diarrhea worldwide and are associated with high rates of mortality and linear growth faltering in children living in low- to middle-income countries (LMICs). Campylobacter jejuni and Campylobacter… read more here.
Keywords: shotgun metagenomics; infections multiple; campylobacter; campylobacter species ... See more keywords
Limited Correlation of Shotgun Metagenomics Following Host Depletion and Routine Diagnostics for Viruses and Bacteria in Low Concentrated Surrogate and Clinical Samples
Sign Up to like & getrecommendations! Published in 2018 at "Frontiers in Cellular and Infection Microbiology"
DOI: 10.3389/fcimb.2018.00375
Abstract: The etiologic cause of encephalitis, meningitis or meningo-encephalitis is unknown in up to 70% of cases. Clinical shotgun metagenomics combined with host depletion is a promising technique to identify infectious etiologies of central nervous system… read more here.
Keywords: csf; host depletion; host; depletion ... See more keywords