An open, multi-vendor, multi-field-strength brain MR dataset and analysis of publicly available skull stripping methods agreement
Sign Up to like & getrecommendations! Published in 2018 at "NeuroImage"
DOI: 10.1016/j.neuroimage.2017.08.021
Abstract: ABSTRACT This paper presents an open, multi‐vendor, multi‐field strength magnetic resonance (MR) T1‐weighted volumetric brain imaging dataset, named Calgary‐Campinas‐359 (CC‐359). The dataset is composed of images of older healthy adults (29–80 years) acquired on scanners… read more here.
Keywords: field strength; field; dataset; skull stripping ... See more keywords
DIKA-Nets: Domain-invariant knowledge-guided attention networks for brain skull stripping of early developing macaques
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DOI: 10.1016/j.neuroimage.2020.117649
Abstract: As non-human primates, macaques have a close phylogenetic relationship to human beings and have been proven to be a valuable and widely used animal model in human neuroscience research. Accurate skull stripping (aka. brain extraction)… read more here.
Keywords: domain invariant; information; skull stripping; developing macaques ... See more keywords
Automated joint skull-stripping and segmentation with Multi-Task U-Net in large mouse brain MRI databases
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DOI: 10.1016/j.neuroimage.2021.117734
Abstract: Skull-stripping and region segmentation are fundamental steps in preclinical magnetic resonance imaging (MRI) studies, and these common procedures are usually performed manually. We present Multi-task U-Net (MU-Net), a convolutional neural network designed to accomplish both… read more here.
Keywords: segmentation; mri; skull stripping; brain ... See more keywords
Automated Skull Stripping in Mouse Functional Magnetic Resonance Imaging Analysis Using 3D U-Net
Sign Up to like & getrecommendations! Published in 2022 at "Frontiers in Neuroscience"
DOI: 10.3389/fnins.2022.801769
Abstract: Skull stripping is an initial and critical step in the pipeline of mouse fMRI analysis. Manual labeling of the brain usually suffers from intra- and inter-rater variability and is highly time-consuming. Hence, an automatic and… read more here.
Keywords: skull stripping; mouse; mouse fmri; analysis ... See more keywords