Embedding to reference t-SNE space addresses batch effects in single-cell classification
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DOI: 10.1007/s10994-021-06043-1
Abstract: Dimensionality reduction techniques, such as t-SNE, can construct informative visualizations of high-dimensional data. When jointly visualising multiple data sets, a straightforward application of these methods often fails; instead of revealing underlying classes, the resulting visualizations… read more here.
Keywords: reference; batch effects; sne space; single cell ... See more keywords