SNP‐based heritability and selection analyses: Improved models and new results
Sign Up to like & getrecommendations! Published in 2022 at "BioEssays"
DOI: 10.1002/bies.202100170
Abstract: Complex‐trait genetics has advanced dramatically through methods to estimate the heritability tagged by SNPs, both genome‐wide and in genomic regions of interest such as those defined by functional annotations. The models underlying many of these… read more here.
Keywords: based heritability; heritability; heritability selection; snp based ... See more keywords
Comment on “Noninvasive prenatal screening at low fetal fraction: comparing whole‐genome sequencing and single‐nucleotide polymorphism methods”
Sign Up to like & getrecommendations! Published in 2017 at "Prenatal Diagnosis"
DOI: 10.1002/pd.5072
Abstract: This correspondence is in reference to the article entitled, ‘Noninvasive Prenatal Screening at Low Fetal Fraction: Comparing Whole-Genome Sequencing and Single-Nucleotide Polymorphism Methods’ by Artieri, et al., which was recently published in Prenatal Diagnosis. The… read more here.
Keywords: whole genome; low fetal; method; fetal fraction ... See more keywords
The SNP-Based Heritability — A Commentary on Yang et al. (2010)
Sign Up to like & getrecommendations! Published in 2020 at "Twin Research and Human Genetics"
DOI: 10.1017/thg.2020.25
Abstract: Abstract I write this commentary as a part of a special issue published in this journal to celebrate Nick Martin’s contribution to the field of human genetics. In this commentary, I briefly describe the background… read more here.
Keywords: genetics; based heritability; yang 2010; snp based ... See more keywords
Transitioning from microsatellites to SNP‐based microhaplotypes in genetic monitoring programmes: Lessons from paired data spanning 20 years
Sign Up to like & getrecommendations! Published in 2022 at "Molecular Ecology"
DOI: 10.1111/mec.16760
Abstract: Many long‐term genetic monitoring programmes began before next‐generation sequencing became widely available. Older programmes can now transition to new marker systems usually consisting of 1000s of SNP loci, but there are still important questions about… read more here.
Keywords: based microhaplotypes; genetic monitoring; snp based; monitoring ... See more keywords
Fine-scale subpopulation detection via an SNP-based unsupervised method: A case study on the 1000 Genomes Project resources.
Sign Up to like & getrecommendations! Published in 2022 at "Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing"
DOI: 10.1142/9789811270611_0023
Abstract: SNP-based information is used in several existing clustering methods to detect shared genetic ancestry or to identify population substructure. Here, we present a methodology, called IPCAPS for unsupervised population analysis using iterative pruning. Our method,… read more here.
Keywords: genomes project; snp based; 1000 genomes; method ... See more keywords
Comparison between whole exome sequencing (WES) and single nucleotide polymorphism (SNP)-based tumor mutation burden analysis.
Sign Up to like & getrecommendations! Published in 2019 at "Journal of Clinical Oncology"
DOI: 10.1200/jco.2019.37.15_suppl.2634
Abstract: 2634 Background: Immune checkpoint inhibitors (ICI) block proteins which enable cancer cells to evade the immune system. Recent studies have shown that the higher the tumor mutation burden (TMB) the greater the likelihood of response… read more here.
Keywords: analysis; sbtmb; tumor; snp based ... See more keywords
The SNP-Based Profiling of Montecristo Feral Goat Populations Reveals a History of Isolation, Bottlenecks, and the Effects of Management
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DOI: 10.3390/genes13020213
Abstract: The Montecristo wild goat is an endangered feral population that has been on the homonymous island in the Tuscan Archipelago since ancient times. The origins of Montecristo goats are still debated, with authors dating their… read more here.
Keywords: goat; history; montecristo goats; snp based ... See more keywords
SNP-Based Analysis Reveals Authenticity and Genetic Similarity of Russian Indigenous V. vinifera Grape Cultivars
Sign Up to like & getrecommendations! Published in 2021 at "Plants"
DOI: 10.3390/plants10122696
Abstract: 9 Russian Vitis vinifera grape varieties and the European variety Muscat Hamburg were sequenced and genotyped using 527 SNPs (single nucleotide polymorphisms) with high minor allele frequency for the first time. The data were coupled… read more here.
Keywords: snp based; vinifera; vinifera grape; based analysis ... See more keywords