SNP Discovery from Single and Multiplex Genome Assemblies of Non-model Organisms.
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DOI: 10.1007/978-1-4939-7514-3_9
Abstract: Population genetic studies of non-model organisms often rely on initial ascertainment of genetic markers from a single individual or a small pool of individuals. This initial screening has been a significant barrier to beginning population… read more here.
Keywords: snp discovery; model; model organisms; genome ... See more keywords
SNP Discovery Using a Pangenome: Has the Single Reference Approach Become Obsolete?
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DOI: 10.3390/biology6010021
Abstract: Increasing evidence suggests that a single individual is insufficient to capture the genetic diversity within a species due to gene presence absence variation. In order to understand the extent to which genomic variation occurs in… read more here.
Keywords: using pangenome; analysis; reference; snp discovery ... See more keywords