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Published in 2025 at "Drug testing and analysis"
DOI: 10.1002/dta.70006
Abstract: An innovative software tool for the rapid and efficient simulation of the metabolism of new psychoactive substances (NPS) was developed, based on the open-source project mzmine, and applied. NPS are compounds designed to mimic the…
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Keywords:
tool;
electrochemistry;
metabolism;
software tool ... See more keywords
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Published in 2017 at "Biosystems Engineering"
DOI: 10.1016/j.biosystemseng.2017.10.007
Abstract: The increase in the design and utilisation of real-time location systems has produced a huge amount of data to be handled in real time. As a consequence, challenges still exist in improving the analysis process…
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Keywords:
cow;
real time;
analysis;
time ... See more keywords
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Published in 2019 at "IFAC-PapersOnLine"
DOI: 10.1016/j.ifacol.2019.10.039
Abstract: Abstract A current issue in the democratization of metal based additive manufacturing is the rapid and reliable development of process parameters for a range of alloys and a range of dependent and independent processing conditions.…
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Keywords:
predictive software;
tool;
process;
using predictive ... See more keywords
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Published in 2020 at "IFAC-PapersOnLine"
DOI: 10.1016/j.ifacol.2020.12.1801
Abstract: Abstract In this paper we present a simple software tool, designed as a game, that can be used to make (especially primary) school students aware of the importance of control systems. An overhead crane model…
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Keywords:
students aware;
control;
school students;
software tool ... See more keywords
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Published in 2022 at "Analytical chemistry"
DOI: 10.1021/acs.analchem.1c04719
Abstract: Chemical isotope labeling liquid chromatography mass spectrometry (LC-MS) is an emerging metabolomic strategy for the quantification and characterization of small molecular compounds in biological samples. However, its subsequent data analysis is not straightforward due to…
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Keywords:
mass;
mass defect;
idf;
software tool ... See more keywords
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Published in 2021 at "Journal of proteome research"
DOI: 10.1021/acs.jproteome.0c01029
Abstract: Liquid chromatography with tandem mass spectrometry (MS/MS) has been widely used in proteomics. Although a typical experiment includes both MS and MS/MS scans, existing bioinformatics research has focused far more on MS/MS data than on…
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Keywords:
feature;
mass spectrometry;
peptide feature;
liquid chromatography ... See more keywords
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Published in 2022 at "Briefings in bioinformatics"
DOI: 10.1093/bib/bbac057
Abstract: The Cellular Thermal Shift Assay (CETSA) plays an important role in drug-target identification, and statistical analysis is a crucial step significantly affecting conclusion. We put forward ProSAP (Protein Stability Analysis Pod), an open-source, cross-platform and…
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Keywords:
software;
statistical analysis;
software tool;
analysis ... See more keywords
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Published in 2022 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btac392
Abstract: MOTIVATION The role of metals in shaping and functioning of RNA is a well established fact and the understanding of that through the analysis of structural data has biological relevance. Often metal ions bind to…
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Keywords:
tool;
rna;
software tool;
metal ... See more keywords
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Published in 2018 at "Bioinformatics"
DOI: 10.1093/bioinformatics/bty151
Abstract: Motivation: Mass spectrometry combined with enrichment strategies for phosphorylated peptides has been successfully employed for two decades to identify sites of phosphorylation. However, unambiguous phosphosite assignment is considered challenging. Given that siteāspecific phosphorylation events function…
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Keywords:
phosphosite assignment;
simphospho software;
software tool;
software ... See more keywords
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Published in 2022 at "Biology Open"
DOI: 10.1101/2022.07.02.498535
Abstract: Acute myeloid leukaemia and myelodysplastic syndromes are cancers of the bone marrow with poor prognosis in frail and older patients. To investigate cancer pathophysiology and therapies, confocal imaging of fluorescent cancer cells, and their response…
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Keywords:
cell;
zebrafish larvae;
cancer;
software tool ... See more keywords
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Published in 2022 at "Journal of Applied Crystallography"
DOI: 10.1107/s1600576722005349
Abstract: The MATLAB-based software tool MuMag2022 is presented for the analysis of magnetic-field-dependent unpolarized small-angle neutron scattering data of bulk ferromagnets such as elemental nanocrystalline ferromagnets, magnetic nanocomposites or magnetic steels.
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Keywords:
field dependent;
dependent unpolarized;
unpolarized small;
software tool ... See more keywords