Articles with "solvent model" as a keyword



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Theoretical insight into the conversion of glucose to 5-hydroxymethylfurfural in subcritical water

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Published in 2021 at "Journal of Fuel Chemistry and Technology"

DOI: 10.1016/s1872-5813(21)60124-x

Abstract: Abstract The reaction mechanism of the isomerization of glucose to fructose and further dehydration of fructose to 5-hydroxymethylfurfural (5-HMF) in subcritical water was investigated by the dispersion-corrected density functional theory (DFT-D) method with Dmol3 package… read more here.

Keywords: solvent model; water; kcal mol; conversion ... See more keywords
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Solvent Model Benchmark for Molecular Dynamics of Glycosaminoglycans

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Published in 2023 at "Journal of Chemical Information and Modeling"

DOI: 10.1021/acs.jcim.2c01472

Abstract: In computational studies of glycosaminoglycans (GAGs), a group of anionic, periodic linear polysaccharides, so far there has been very little discussion about the role of solvent models in the molecular dynamics simulations of these molecules.… read more here.

Keywords: model benchmark; molecular dynamics; solvent models; solvent model ... See more keywords
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Machine learning based implicit solvent model for aqueous-solution alanine dipeptide molecular dynamics simulations

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Published in 2023 at "RSC Advances"

DOI: 10.1039/d2ra08180f

Abstract: Inspired by the recent work from NoĆ© and coworkers on the development of machine learning based implicit solvent model for the simulation of solvated peptides [Chen et al., J. Chem. Phys., 2021, 155, 084101], here… read more here.

Keywords: solvent model; based implicit; implicit solvent; machine learning ... See more keywords