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SparkBLAST: scalable BLAST processing using in-memory operations

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0 Published in 2017 at "BMC Bioinformatics"

DOI: 10.1186/s12859-017-1723-8

Abstract: BackgroundThe demand for processing ever increasing amounts of genomic data has raised new challenges for the implementation of highly scalable and efficient computational systems. In this paper we propose SparkBLAST, a parallelization of a sequence… read more here.

Keywords: blast processing; sparkblast scalable; memory operations;