Articles with "spatzie package" as a keyword



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spatzie: an R package for identifying significant transcription factor motif co-enrichment from enhancer-promoter interactions.

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Published in 2022 at "Nucleic acids research"

DOI: 10.1093/nar/gkac036

Abstract: Genomic interactions provide important context to our understanding of the state of the genome. One question is whether specific transcription factor interactions give rise to genome organization. We introduce spatzie, an R package and a… read more here.

Keywords: enhancer promoter; transcription factor; transcription; spatzie package ... See more keywords