GenomegaMap: Within-Species Genome-Wide dN/dS Estimation from over 10,000 Genomes
Sign Up to like & getrecommendations! Published in 2020 at "Molecular Biology and Evolution"
DOI: 10.1093/molbev/msaa069
Abstract: Abstract The dN/dS ratio provides evidence of adaptation or functional constraint in protein-coding genes by quantifying the relative excess or deficit of amino acid-replacing versus silent nucleotide variation. Inexpensive sequencing promises a better understanding of… read more here.
Keywords: species genome; genome wide; wide estimation; within species ... See more keywords
Exploiting genomic synteny in Felidae: cross-species genome alignments and SNV discovery can aid conservation management
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DOI: 10.1186/s12864-021-07899-2
Abstract: Background While recent advances in genomics has enabled vast improvements in the quantification of genome-wide diversity and the identification of adaptive and deleterious alleles in model species, wildlife and non-model species have largely not reaped… read more here.
Keywords: reference; species genome; cross species; snv discovery ... See more keywords
The wild species genome ancestry of domestic chickens
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DOI: 10.1186/s12915-020-0738-1
Abstract: Background Hybridisation and introgression play key roles in the evolutionary history of animal species. They are commonly observed within several orders in wild birds. The domestic chicken Gallus gallus domesticus is the most common livestock species.… read more here.
Keywords: junglefowl; genome wide; species genome; domestic chicken ... See more keywords