SRAPs and EST-SSRs provide useful molecular diversity for targeting drought and salinity tolerance in Indian mustard
Sign Up to like & getrecommendations! Published in 2019 at "Molecular Biology Reports"
DOI: 10.1007/s11033-019-04590-4
Abstract: Abiotic stress tolerance is one of the target trait in crop breeding under climate change scenario. Selection of suitable gene pools among available germplasm is first requisite for any crop improvement programme. Drought and salinity… read more here.
Keywords: indian mustard; tolerance; est ssrs; drought salinity ... See more keywords
Radiological anatomy of spontaneous splenorenal shunts in patients with chronic liver disease
Sign Up to like & getrecommendations! Published in 2017 at "Japanese Journal of Radiology"
DOI: 10.1007/s11604-017-0623-1
Abstract: PurposeWe evaluated anatomical variations of spontaneous splenorenal shunt (SSRS) and the prevalence of portosystemic shunts in patients with chronic liver disease by CT.Materials and methodsA total of 451 patients with chronic liver disease underwent contrast-enhanced… read more here.
Keywords: ssrs; anatomy; patients chronic; chronic liver ... See more keywords
Genome-wide characterization and analysis of microsatellite sequences in camelid species
Sign Up to like & getrecommendations! Published in 2019 at "Mammal Research"
DOI: 10.1007/s13364-019-00458-x
Abstract: Microsatellites or simple sequence repeats (SSRs) are among the genetic markers most widely utilized in research. This includes applications in numerous fields such as genetic conservation, paternity testing, and molecular breeding. Though ordered draft genome… read more here.
Keywords: genome wide; ssrs; camelid species; characterization analysis ... See more keywords
Identification of genomic SSRs in cluster bean (Cyamopsis tetragonoloba) and demonstration of their utility in genetic diversity analysis
Sign Up to like & getrecommendations! Published in 2019 at "Industrial Crops and Products"
DOI: 10.1016/j.indcrop.2019.03.028
Abstract: Abstract Cluster bean (Cyamopsis tetragonoloba), also known as guar, is an important industrial crop owing to its high gum content in the endosperm. Availability of sufficient genomic resources, especially, DNA markers, greatly aids genetic improvement… read more here.
Keywords: cyamopsis; genomic ssrs; cluster bean; ssrs ... See more keywords
Characterization of porcine simple sequence repeat variation on a population scale with genome resequencing data
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DOI: 10.1038/s41598-017-02600-8
Abstract: Simple sequence repeats (SSRs) are used as polymorphic molecular markers in many species. They contribute very important functional variations in a range of complex traits; however, little is known about the variation of most SSRs… read more here.
Keywords: variation; ssrs; simple sequence; genome resequencing ... See more keywords
Comparative analysis, distribution, and characterization of microsatellites in Orf virus genome
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DOI: 10.1038/s41598-020-70634-6
Abstract: Genome-wide in-silico identification of microsatellites or simple sequence repeats (SSRs) in the Orf virus (ORFV), the causative agent of contagious ecthyma has been carried out to investigate the type, distribution and its potential role in… read more here.
Keywords: orf virus; analysis; ssrs; genome ... See more keywords
A deeper view into the significance of simple sequence repeats in pre-miRNAs provides clues for its possible roles in determining the function of microRNAs
Sign Up to like & getrecommendations! Published in 2018 at "BMC Genetics"
DOI: 10.1186/s12863-018-0615-x
Abstract: BackgroundThe central tenet of ‘genome content’ has been that the ‘non-coding’ parts are highly enriched with ‘microsatellites’ or ‘Simple Sequence Repeats’ (SSRs). We presume that the presence and change in number of repeat unit (n)… read more here.
Keywords: pre mirnas; ssrs; simple sequence; function ... See more keywords
Characterization of 20 complete plastomes from the tribe Laureae (Lauraceae) and distribution of small inversions
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DOI: 10.1371/journal.pone.0224622
Abstract: Lindera Thunb. (Lauraceae) consists of approximately 100 species, mainly distributed in the temperate and tropical regions of East Asia. In this study, we report 20 new, complete plastome sequences including 17 Lindera species and three… read more here.
Keywords: ssrs; tribe laureae; complete plastomes; characterization complete ... See more keywords
Identification and validation of novel EST-SSR markers in olives
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DOI: 10.1590/1678-992x-2016-0111
Abstract: The olive (Olea europaea L.) is a leading oil crop in the Mediterranean area. Limited information on the inheritance of agronomic significant traits hinders progress in olive breeding programs, which encourages the development of markers… read more here.
Keywords: identification validation; est ssrs; ssrs; ssr markers ... See more keywords
In silico identification of expressed sequence tags based simple sequence repeats (EST-SSRs) markers in Trifolium species
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DOI: 10.2306/scienceasia1513-1874.2020.001
Abstract: The EST-SSRs (genic SSRs) are the microsatellites in expressed sequence tags (ESTs). Advancement in functional genomics has contributed mainly for the identification of ESTs in different species and made them available in databases. They are… read more here.
Keywords: est ssrs; expressed sequence; ssrs; sequence tags ... See more keywords
SSRMMD: A Rapid and Accurate Algorithm for Mining SSR Feature Loci and Candidate Polymorphic SSRs Based on Assembled Sequences
Sign Up to like & getrecommendations! Published in 2020 at "Frontiers in Genetics"
DOI: 10.3389/fgene.2020.00706
Abstract: Microsatellites or simple sequence repeats (SSRs) are short tandem repeats of DNA widespread in genomes and transcriptomes of diverse organisms and are used in various genetic studies. Few software programs that mine SSRs can be… read more here.
Keywords: algorithm; ssrmmd rapid; polymorphic ssrs; ssrs ... See more keywords