Enhancing Statistical Multiple Sequence Alignment and Tree Inference Using Structural Information.
Sign Up to like & getrecommendations! Published in 2019 at "Methods in molecular biology"
DOI: 10.1007/978-1-4939-8736-8_10
Abstract: For highly divergent sequences, there is often insufficient information to reliably construct alignments and phylogenetic trees. Since protein structure may be strongly conserved despite large divergences in sequence, structural information can be used to help… read more here.
Keywords: structural information; information; alignment; tree ... See more keywords
A local structural information representation method for image quality assessment
Sign Up to like & getrecommendations! Published in 2020 at "Multimedia Tools and Applications"
DOI: 10.1007/s11042-020-09022-1
Abstract: Image is a typical example of visual data, and its quality inevitably affects its application. Hence, measuring image quality accurately is a beneficial task. In practical application, there are different image types e.g. natural image… read more here.
Keywords: structural information; quality; image; image quality ... See more keywords
Trace Information Extraction (TIE): A new approach to extract structural information from traces in geological maps
Sign Up to like & getrecommendations! Published in 2019 at "Journal of Structural Geology"
DOI: 10.1016/j.jsg.2019.06.007
Abstract: Abstract Geological maps are crucial for the interpretation of geological structures. Next to orientation measurements, fault traces and bedrock interface traces account for an important part of the exposure of structural information on maps. However,… read more here.
Keywords: structural information; information extraction; trace information; trace ... See more keywords
How is structural divergence related to evolutionary information?
Sign Up to like & getrecommendations! Published in 2018 at "Molecular phylogenetics and evolution"
DOI: 10.1016/j.ympev.2018.06.033
Abstract: The analysis of evolutionary information in a protein family, such as conservation and covariation, is often linked to its structural information. Multiple sequence alignments of distant homologous sequences are used to measure evolutionary variables. Although… read more here.
Keywords: structural information; information; structural divergence; evolutionary information ... See more keywords
Discovery of Highly Bioactive Peptides through Hierarchical Structural Information and Molecular Dynamics Simulations
Sign Up to like & getrecommendations! Published in 2024 at "Journal of chemical information and modeling"
DOI: 10.1021/acs.jcim.4c01006
Abstract: Peptide drugs play an essential role in modern therapeutics, but the computational design of these molecules is hindered by several challenges. Traditional methods like molecular docking and molecular dynamics (MD) simulation, as well as recent… read more here.
Keywords: information; hierarchical structural; molecular dynamics; discovery highly ... See more keywords
Exploiting Cryo-EM Structural Information and All-Atom Simulations To Decrypt the Molecular Mechanism of Splicing Modulators
Sign Up to like & getrecommendations! Published in 2020 at "Journal of chemical information and modeling"
DOI: 10.1021/acs.jcim.9b00635
Abstract: Splicing modulators (SMs) pladienolides, herboxidienes and spliceostatins exert their antitumor activity by altering the ability of SF3B1 and PHF5A proteins, components of SF3b splicing factor, to recognize distinct intron branching point sequences, thus finely calibrating… read more here.
Keywords: structural information; sf3b1; cryo structural; information ... See more keywords
Insights into a Low-Rank Naomaohu Coal Structural Information by Multistage Fractions Coupled with LIAD-VUVPI-TOFMS
Sign Up to like & getrecommendations! Published in 2022 at "ACS Omega"
DOI: 10.1021/acsomega.1c06619
Abstract: In-depth insights into the chemical composition and structural information of coal are an effective way to improve the efficiency of coal utilization. Laser-induced acoustic desorption coupling with vacuum ultraviolet photoionization time-of-flight mass spectrometry (LIAD-VUVPI-TOFMS) was… read more here.
Keywords: vuvpi tofms; liad vuvpi; coal; structural information ... See more keywords
multistrap: boosting phylogenetic analyses with structural information
Sign Up to like & getrecommendations! Published in 2025 at "Nature Communications"
DOI: 10.1038/s41467-024-55264-0
Abstract: In a phylogeny, trustworthy reliability branch support estimates are as important as the tree itself. We show that reliability support values based on bootstrapping can be improved by combining sequence and structural information from proteins.… read more here.
Keywords: support values; information; sequence; structural information ... See more keywords
Change detection in multispectral images based on multiband structural information
Sign Up to like & getrecommendations! Published in 2018 at "Remote Sensing Letters"
DOI: 10.1080/2150704x.2018.1516310
Abstract: ABSTRACT Change vector analysis (CVA) and spectral angle mapper (SAM) are usually used to generate difference image in change detection of multispectral images. Although CVA and SAM can describe the difference between multispectral images, they… read more here.
Keywords: structural information; multiband structural; multispectral images; change detection ... See more keywords
Robust extraction of quantitative structural information from high-variance histological images of livers from necropsied Soay sheep
Sign Up to like & getrecommendations! Published in 2017 at "Royal Society Open Science"
DOI: 10.1098/rsos.170111
Abstract: Quantitative information is essential to the empirical analysis of biological systems. In many such systems, spatial relations between anatomical structures is of interest, making imaging a valuable data acquisition tool. However, image data can be… read more here.
Keywords: structural information; information; high variance; image ... See more keywords
A Set Space Model to Capture Structural Information of a Sentence
Sign Up to like & getrecommendations! Published in 2019 at "IEEE Access"
DOI: 10.1109/access.2019.2944559
Abstract: The context of a sentence is composed of a limited number of words. This leads to the feature sparsity problem whereby the sentence’s meaning is easily influenced by language phenomena such as polysemy, ambiguity and… read more here.
Keywords: structural information; set space; sentence; capture structural ... See more keywords