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Published in 2021 at "Methods in molecular biology"
DOI: 10.1007/978-1-0716-0892-0_14
Abstract: Genome sequencing projects have resulted in a rapid increase in the number of known protein sequences. In contrast, only about one-hundredth of these sequences have been characterized at atomic resolution using experimental structure determination methods.…
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Keywords:
protein;
modeling modeller;
protein structure;
structure modeling ... See more keywords
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Published in 2019 at "Methods in molecular biology"
DOI: 10.1007/978-1-4939-8736-8_21
Abstract: Antibodies are proteins of the adaptive immune system; they can be designed to bind almost any molecule, and are increasingly being used as biotherapeutics. Experimental antibody design is an expensive and time-consuming process, and computational…
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Keywords:
design;
antibody;
structure modeling;
antibody structure ... See more keywords
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Published in 2020 at "Journal of chemical theory and computation"
DOI: 10.1021/acs.jctc.0c00621
Abstract: We have carried out a comprehensive study of the influence of electronic structure modeling and junction structure description on the first-principles calculation of the spin polarization in molecular junctions caused by the chiral induced spin…
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Keywords:
electronic structure;
structure modeling;
spin;
structure ... See more keywords
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2
Published in 2023 at "ACS Central Science"
DOI: 10.1021/acscentsci.3c00063
Abstract: Despite advances in characterizing the structures and functions of G protein-coupled receptors (GPCRs), our understanding of GPCR activation and signaling is still limited by the lack of information on conformational dynamics. It is particularly challenging…
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Keywords:
linking mass;
structure modeling;
structure;
mass spectrometry ... See more keywords
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Published in 2022 at "Nucleic Acids Research"
DOI: 10.1093/nar/gkac372
Abstract: Abstract Significant improvements have been made in the efficiency and accuracy of RNA 3D structure prediction methods in recent years; however, many tools developed in the field stay exclusive to only a few bioinformatic groups.…
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Keywords:
rna structure;
structure modeling;
tools online;
rna ... See more keywords