Connection between two historical tuberculosis outbreak sites in Japan, Honshu, by a new ancestral Mycobacterium tuberculosis L2 sublineage
Sign Up to like & getrecommendations! Published in 2022 at "Epidemiology and Infection"
DOI: 10.1017/s0950268822000048
Abstract: Abstract By gathering 680 publicly available Sequence Read Archives from isolates of Mycobacterium tuberculosis complex (MTBC) including 190 belonging to the lineage 2 Beijing, and using an in-house bioinformatical pipeline, the TB-Annotator, that analyses more… read more here.
Keywords: mycobacterium tuberculosis; tuberculosis; two historical; asia ancestral ... See more keywords
Phylogenetic analysis and antibiotic resistance of Shigella sonnei isolates.
Sign Up to like & getrecommendations! Published in 2022 at "FEMS microbiology letters"
DOI: 10.1093/femsle/fnac042
Abstract: Shigellosis is one of the most important gastric infections caused by different species of Shigella and has been regarded as a serious threat to public health. Lineage/sublineage profile of S. sonnei is strongly associated with… read more here.
Keywords: antibiotic resistance; sonnei strains; shigella; resistance ... See more keywords
Emergence of Neisseria meningitidis W South American sublineage strain variant in Brazil: disease and carriage.
Sign Up to like & getrecommendations! Published in 2022 at "Journal of medical microbiology"
DOI: 10.1099/jmm.0.001484
Abstract: Introduction. Invasive meningococcal disease is a major health problem, impacting morbidity and mortality worldwide. Exploratory genomics has revealed insights into adaptation, transmissibility and virulence to elucidate endemic, outbreaks or epidemics caused by Neisseria meningitidis serogroup… read more here.
Keywords: neisseria meningitidis; carriage; brazil; emergence ... See more keywords
Multidrug-resistant toxigenic Corynebacterium diphtheriae sublineage 453 with two novel resistance genomic islands
Sign Up to like & getrecommendations! Published in 2023 at "Microbial Genomics"
DOI: 10.1099/mgen.0.000923
Abstract: Antimicrobial therapy is important for case management of diphtheria, but knowledge on the emergence of multidrug-resistance in Corynebacterium diphtheriae is scarce. We report on the genomic features of two multidrug-resistant toxigenic isolates sampled from wounds… read more here.
Keywords: resistant toxigenic; resistance; multidrug resistant; corynebacterium diphtheriae ... See more keywords
Dissecting the genotypic features of a fluoroquinolone-resistant Pseudomonas aeruginosa ST316 sublineage causing ear infections in Shanghai, China
Sign Up to like & getrecommendations! Published in 2023 at "Microbial Genomics"
DOI: 10.1099/mgen.0.000989
Abstract: Limited information is available regarding the genomic characteristics of P. aeruginosa causing ear infections. Our aim is to characterize the genotypic features of an emerging ST316 sublineage causing aural infections in Shanghai. A total of… read more here.
Keywords: ear infections; st316 sublineage; sublineage causing; causing ear ... See more keywords
Foot-and-mouth disease viruses of the O/ME-SA/Ind-2001e sublineage in Pakistan.
Sign Up to like & getrecommendations! Published in 2021 at "Transboundary and emerging diseases"
DOI: 10.1111/tbed.14134
Abstract: The presence of foot-and-mouth disease virus (FMDV) of the O/ME-SA/Ind-2001e sublineage within Pakistan was initially detected in two samples collected during 2019. Analysis of further serotype O FMDVs responsible for disease outbreaks in 2019-2020 in… read more here.
Keywords: 2001e sublineage; foot mouth; ind 2001e; mouth disease ... See more keywords
Highly Pathogenic Clone of Shiga Toxin–Producing Escherichia coli O157:H7, England and Wales
Sign Up to like & getrecommendations! Published in 2018 at "Emerging Infectious Diseases"
DOI: 10.3201/eid2412.180409
Abstract: We used whole-genome sequencing to investigate the evolutionary context of an emerging highly pathogenic strain of Shiga toxin–producing Escherichia coli (STEC) O157:H7 in England and Wales. A timed phylogeny of sublineage IIb revealed that the… read more here.
Keywords: highly pathogenic; toxin producing; shiga toxin; sublineage ... See more keywords
Epidemiology and Genetic Characteristics of Porcine Reproductive and Respiratory Syndrome Virus in the Hunan and Hebei Provinces of China
Sign Up to like & getrecommendations! Published in 2023 at "Veterinary Sciences"
DOI: 10.3390/vetsci10010063
Abstract: Simple Summary Porcine reproductive and respiratory syndrome virus (PRRSV) is the major cause of huge economic losses to the pig industry in China. The present study was performed to investigate the epidemiological characteristics of PRRSV… read more here.
Keywords: porcine reproductive; hunan hebei; prrsv; epidemiology ... See more keywords