CSMD: a computational subtraction-based microbiome discovery pipeline for species-level characterization of clinical metagenomic samples
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DOI: 10.1093/bioinformatics/btz790
Abstract: MOTIVATION Microbiome analyses of clinical samples with low microbial biomass are challenging because of the very small quantities of microbial DNA relative to the human host, ubiquitous contaminating DNA in sequencing experiments, and the large… read more here.
Keywords: csmd computational; pipeline; subtraction based; computational subtraction ... See more keywords