Optimizing partitioned CSR-based SpGEMM on the Sunway TaihuLight
Sign Up to like & getrecommendations! Published in 2019 at "Neural Computing and Applications"
DOI: 10.1007/s00521-019-04121-z
Abstract: General sparse matrix-sparse matrix (SpGEMM) multiplication is one of the basic kernels in a great many applications. Several works focus on various optimizations for SpGEMM. To fully exploit the powerful computing capability of the Sunway… read more here.
Keywords: spgemm sunway; csr based; optimizing partitioned; based spgemm ... See more keywords
SW-Tandem: a highly efficient tool for large-scale peptide identification with parallel spectrum dot product on Sunway TaihuLight
Sign Up to like & getrecommendations! Published in 2019 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btz147
Abstract: SUMMARY Tandem mass spectrometry (MS/MS) based database searching is a widely acknowledged and adopted method that identifies peptide sequence in shotgun proteomics. However, database searching is extremely computationally expensive, which can take days even weeks… read more here.
Keywords: large scale; tool; sunway taihulight; peptide identification ... See more keywords
Enabling Large-Scale Simulation of CAM on the Sunway TaihuLight Supercomputer
Sign Up to like & getrecommendations! Published in 2022 at "IEEE Transactions on Computers"
DOI: 10.1109/tc.2021.3063422
Abstract: The Community Atmosphere Model (CAM) has been ported, redesigned, and scaled to the full system of the Sunway TaihuLight, and provides peta-scale climate modeling performance. Based on a novel domain decomposition method, we have fully… read more here.
Keywords: scale simulation; enabling large; sunway taihulight; large scale ... See more keywords
swMR: A Framework for Accelerating MapReduce Applications on Sunway Taihulight
Sign Up to like & getrecommendations! Published in 2021 at "IEEE Transactions on Emerging Topics in Computing"
DOI: 10.1109/tetc.2018.2881265
Abstract: MapReduce has already been an indispensable framework for the programmers to develop big data applications at scale without concerning the underlying complex system details. However, such an important framework is missing on the Sunway many-core… read more here.
Keywords: mapreduce; swmr framework; sunway taihulight; accelerating mapreduce ... See more keywords
PEPS++: Towards Extreme-Scale Simulations of Strongly Correlated Quantum Many-Particle Models on Sunway TaihuLight
Sign Up to like & getrecommendations! Published in 2018 at "IEEE Transactions on Parallel and Distributed Systems"
DOI: 10.1109/tpds.2018.2848618
Abstract: The study of strongly frustrated magnetic systems has drawn great attentions from both theoretical and experimental physics. Efficient simulations of these models are essential for understanding their exotic properties. Here we present PEPS++, a novel… read more here.
Keywords: correlated quantum; quantum many; extreme scale; sunway taihulight ... See more keywords
Bio-ESMD: A Data Centric Implementation for Large-Scale Biological System Simulation on Sunway TaihuLight Supercomputer
Sign Up to like & getrecommendations! Published in 2023 at "IEEE Transactions on Parallel and Distributed Systems"
DOI: 10.1109/tpds.2022.3220559
Abstract: Molecular dynamics (MD) simulations of biological systems are playing an increasingly important role in the research of pathogens and drugs. Most MD methods for biological simulations rely on the listed bonds which interact among specific… read more here.
Keywords: sunway taihulight; large scale; data centric; bio esmd ... See more keywords
swHPFM: Refactoring and Optimizing the Structured Grid Fluid Mechanical Algorithm on the Sunway TaihuLight Supercomputer
Sign Up to like & getrecommendations! Published in 2019 at "Applied Sciences"
DOI: 10.3390/app10010072
Abstract: Fluid mechanical simulation is a typical high-performance computing problem. Due to the development of high-precision parallel algorithms, traditional computing platforms are unable to satisfy the computing requirements of large-scale algorithms. The Sunway TaihuLight supercomputer, which… read more here.
Keywords: algorithm; framework; fluid mechanical; sunway taihulight ... See more keywords
Large-Scale Simulation of Full Three-Dimensional Flow and Combustion of an Aero-Turbofan Engine on Sunway TaihuLight Supercomputer
Sign Up to like & getrecommendations! Published in 2023 at "Entropy"
DOI: 10.3390/e25030436
Abstract: Computational fluid dynamics- (CFD-) based component-level numerical simulation technology has been widely used in the design of aeroengines. However, due to the strong coupling effects between components, the numerical simulation of the whole engine considering… read more here.
Keywords: sunway taihulight; full three; three dimensional; engine ... See more keywords