Genomic surveillance of SARS-CoV-2 during the first year of the pandemic in the Bronx enabled clinical and epidemiological inference
Sign Up to like & getrecommendations! Published in 2022 at "Cold Spring Harbor Molecular Case Studies"
DOI: 10.1101/mcs.a006211
Abstract: The Bronx was an early epicenter of the COVID-19 pandemic in the United States. We conducted temporal genomic surveillance of 104 SARS-CoV-2 genomes across the Bronx from March to October 2020. Although the local structure… read more here.
Keywords: genomic surveillance; clinical epidemiological; surveillance sars; bronx ... See more keywords
Genomic surveillance of SARS‐CoV‐2 strains circulating in Iran during six waves of the pandemic
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DOI: 10.1111/irv.13135
Abstract: SARS‐CoV‐2 genomic surveillance is necessary for the detection, monitoring, and evaluation of virus variants, which can have increased transmissibility, disease severity, or other adverse effects. We sequenced 330 SARS‐CoV‐2 genomes during the sixth wave of… read more here.
Keywords: iran; genomic surveillance; cov strains; surveillance sars ... See more keywords
Active environmental surveillance of SARS-CoV-2 in Midwestern United States meatpacking plants
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DOI: 10.1371/journal.pone.0261704
Abstract: This pilot project investigated environmental SARS-CoV-2 presence in seven Midwestern meatpacking plants from May 2020 to January 2021. This study investigated social distancing and infection control practices and incorporated environmental sampling of surfaces and air… read more here.
Keywords: cov midwestern; sars cov; surveillance sars; environmental surveillance ... See more keywords
Genomic surveillance of SARS-CoV-2 Spike gene by sanger sequencing
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DOI: 10.1371/journal.pone.0262170
Abstract: The SARS-CoV-2 responsible for the ongoing COVID pandemic reveals particular evolutionary dynamics and an extensive polymorphism, mainly in Spike gene. Monitoring the S gene mutations is crucial for successful controlling measures and detecting variants that… read more here.
Keywords: spike gene; genomic surveillance; gene; surveillance sars ... See more keywords
Genomic surveillance of SARS-CoV-2 in patients presenting neurological manifestations
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DOI: 10.1371/journal.pone.0270024
Abstract: During the first wave of infections, neurological symptoms in Coronavirus Disease 2019 (COVID-19) patients raised particular concern, suggesting that, in a subset of patients, the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) could invade and… read more here.
Keywords: genomic surveillance; patients presenting; cov patients; surveillance sars ... See more keywords
Serologic Surveillance for SARS-CoV-2 Infection among Wild Rodents, Europe
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DOI: 10.3201/eid2812.221235
Abstract: We report results from serologic surveillance for exposure to SARS-CoV-2 among 1,237 wild rodents and small mammals across Europe. All samples were negative, with the possible exception of 1. Despite suspected potential for human-to-rodent spillover,… read more here.
Keywords: wild rodents; serologic surveillance; cov infection; surveillance sars ... See more keywords
Genomic Surveillance of SARS-CoV-2 Variants in the Dominican Republic and Emergence of a Local Lineage
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DOI: 10.3390/ijerph20085503
Abstract: Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is an RNA virus that evolves over time, leading to new variants. In the current study, we assessed the genomic epidemiology of SARS-CoV-2 in the Dominican Republic. A… read more here.
Keywords: cov variants; genomic surveillance; dominican republic; surveillance sars ... See more keywords