Articles with "swi snf" as a keyword



FET fusion oncoproteins interact with BRD4 and SWI/SNF chromatin remodelling complex subtypes in sarcoma

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Published in 2022 at "Molecular Oncology"

DOI: 10.1002/1878-0261.13195

Abstract: FET fusion oncoproteins containing one of the FET (FUS, EWSR1, TAF15) family proteins juxtaposed to alternative transcription‐factor partners are characteristic of more than 20 types of sarcoma and leukaemia. FET oncoproteins bind to the SWI/SNF… read more here.

Keywords: fet oncoproteins; swi snf; fet fusion; chromatin ... See more keywords

SMARCA4 and SMARCE1 in gastric cancer: Correlation with ARID1A, and microsatellite stability, and SMARCE1 / ERBB2 co‐amplification

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Published in 2023 at "Cancer Medicine"

DOI: 10.1002/cam4.5776

Abstract: Recent studies have shown an association between certain subunits of the SWI/SNF complex with specific tumor characteristics in gastric cancer (GC). In an earlier study, we applied multiregional whole exome sequencing on multiple primary tumor… read more here.

Keywords: cancer; swi snf; gastric cancer; smarca4 smarce1 ... See more keywords
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Differential expression of key subunits of SWI/SNF chromatin remodeling complexes in porcine embryos derived in vitro or in vivo

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Published in 2017 at "Molecular Reproduction and Development"

DOI: 10.1002/mrd.22922

Abstract: In vitro embryo production is an established method for both humans and animals, but is fraught with inferior development and health issues in offspring born after in vitro fertilization procedures. Analysis of epigenetic changes caused… read more here.

Keywords: differential expression; chromatin remodeling; expression key; chromatin ... See more keywords

Transcriptional activation domains interact with ATPase subunits of yeast chromatin remodelling complexes SWI/SNF, RSC and INO80

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Published in 2024 at "Current Genetics"

DOI: 10.1007/s00294-024-01300-x

Abstract: Chromatin remodelling complexes (CRC) are ATP-dependent molecular machines important for the dynamic organization of nucleosomes along eukaryotic DNA. CRCs SWI/SNF, RSC and INO80 can move positioned nucleosomes in promoter DNA, leading to nucleosome-depleted regions which… read more here.

Keywords: chromatin remodelling; snf rsc; activation domains; remodelling complexes ... See more keywords

Heterozygosity for ARID2 loss-of-function mutations in individuals with a Coffin–Siris syndrome-like phenotype

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Published in 2017 at "Human Genetics"

DOI: 10.1007/s00439-017-1757-z

Abstract: Chromatin remodeling is a complex process shaping the nucleosome landscape, thereby regulating the accessibility of transcription factors to regulatory regions of target genes and ultimately managing gene expression. The SWI/SNF (switch/sucrose nonfermentable) complex remodels the… read more here.

Keywords: coffin siris; mutations individuals; swi snf; gene ... See more keywords

Proceedings of the North American Society of Head and Neck Pathology, Los Angeles, CA, March 20, 2022: SWI/SNF-deficient Sinonasal Neoplasms: An Overview

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Published in 2022 at "Head and Neck Pathology"

DOI: 10.1007/s12105-022-01416-x

Abstract: The pathology of poorly differentiated sinonasal malignancies has been the subject of extensive studies during the last decade, which resulted into significant developments in the definitions and histo-/pathogenetic classification of several entities included in the… read more here.

Keywords: deficient; sinonasal; carcinoma; swi snf ... See more keywords

Loss of Snf5 Induces Formation of an Aberrant SWI/SNF Complex.

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Published in 2017 at "Cell reports"

DOI: 10.1016/j.celrep.2017.02.017

Abstract: The SWI/SNF chromatin remodeling complex is highly conserved from yeast to human, and aberrant SWI/SNF complexes contribute to human disease. The Snf5/SMARCB1/INI1 subunit of SWI/SNF is a tumor suppressor frequently lost in pediatric rhabdoid cancers.… read more here.

Keywords: aberrant swi; snf5; swi snf; snf ... See more keywords

Acute depletion of the ARID1A subunit of SWI/SNF complexes reveals distinct pathways for activation and repression of transcription

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Published in 2021 at "Cell Reports"

DOI: 10.1016/j.celrep.2021.109943

Abstract: Summary The ARID1A subunit of SWI/SNF chromatin remodeling complexes is a potent tumor suppressor. Here, a degron is applied to detect rapid loss of chromatin accessibility at thousands of loci where ARID1A acts to generate… read more here.

Keywords: arid1a subunit; swi snf; subunit swi;

In silico screening of cancer-associated mutations in the HSA domain of BRG1 and its role in affecting the Arp-HSA sub-complex of SWI/SNF.

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Published in 2018 at "Computational biology and chemistry"

DOI: 10.1016/j.compbiolchem.2018.07.001

Abstract: SWI/SNF (SWItch/Sucrose Non-Fermentable) complexes regulate the gene expression programs by remodeling the nucleosome architecture of the chromatin functional elements. These large multi-component complexes comprise eight or more subunits and are conserved from yeast to human.… read more here.

Keywords: hsa domain; arp hsa; cancer associated; cancer ... See more keywords
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SWI / SNF Nucleosome Complex-Deficient Colorectal Carcinomas Have Distinct Clinicopathologic Features.

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Published in 2020 at "Human pathology"

DOI: 10.1016/j.humpath.2020.03.009

Abstract: The switch/sucrose-nonfermenting (SWI/SNF) nucleosome complex consists of several proteins that are involved in cellular proliferation and tumor suppression. The aim of this study was to correlate immunohistochemical expression of four SWI/SNF complex subunits, SMARCA2, SMARCB1,… read more here.

Keywords: deficient; deficient tumors; complex deficient; swi snf ... See more keywords

Phosphorylation of Ser1452 on BRG1 inhibits the function of the SWI/SNF complex in chromatin activation.

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Published in 2021 at "Journal of proteomics"

DOI: 10.1016/j.jprot.2021.104319

Abstract: BRG1, one of core subunits of the SWI/SNF chromatin remodeling complex, is frequently mutated in cancers. Previously, we reported significant downregulation of the phosphorylation level of BRG1 on Ser1452 ( read more here.

Keywords: brg1; chromatin; histone; swi snf ... See more keywords