A customized nuclear target enrichment approach for developing a phylogenomic baseline for Dioscorea yams (Dioscoreaceae)
Sign Up to like & getrecommendations! Published in 2019 at "Applications in Plant Sciences"
DOI: 10.1002/aps3.11254
Abstract: Premise We developed a target enrichment panel for phylogenomic studies of Dioscorea, an economically important genus with incompletely resolved relationships. Methods Our bait panel comprises 260 low‐ to single‐copy nuclear genes targeted to work in… read more here.
Keywords: target enrichment; enrichment approach; nuclear target; dioscorea ... See more keywords
Graphene Oxide - Metal Oxide Nanocomposites for On-Target Enrichment and Analysis of Phosphorylated Biomolecules.
Sign Up to like & getrecommendations! Published in 2021 at "Journal of separation science"
DOI: 10.1002/jssc.202001276
Abstract: Surface of MALDI-MS (matrix assisted laser desorption/ionization mass spectrometry) target is modified for improved signal strength and detection of analytes. Developed method includes on-target enrichment and detection of phosphopeptides / phospholipids using graphene oxide -… read more here.
Keywords: graphene oxide; oxide metal; target enrichment; oxide nanocomposites ... See more keywords
Target-enrichment sequencing for detailed characterization of small RNAs.
Sign Up to like & getrecommendations! Published in 2018 at "Nature protocols"
DOI: 10.1038/nprot.2018.001
Abstract: Identification of important, functional small RNA (sRNA) species is currently hampered by the lack of reliable and sensitive methods to isolate and characterize them. We have developed a method, termed target-enrichment of sRNAs (TEsR), that… read more here.
Keywords: target enrichment; sequencing detailed; target; characterization small ... See more keywords
Target-enrichment sequencing yields valuable genomic data for challenging-to-culture bacteria of public health importance
Sign Up to like & getrecommendations! Published in 2022 at "Microbial Genomics"
DOI: 10.1099/mgen.0.000836
Abstract: Genomic data contribute invaluable information to the epidemiological investigation of pathogens of public health importance. However, whole-genome sequencing (WGS) of bacteria typically relies on culture, which represents a major hurdle for generating such data for… read more here.
Keywords: culture; public health; health importance; enrichment sequencing ... See more keywords
Utilizing paralogues for phylogenetic reconstruction has the potential to increase species tree support and reduce gene tree discordance in target enrichment data
Sign Up to like & getrecommendations! Published in 2022 at "Molecular Ecology Resources"
DOI: 10.1111/1755-0998.13684
Abstract: The analysis of target enrichment data in phylogenetics lacks optimization toward using paralogues for phylogenetic reconstruction. We developed a novel approach of detecting paralogues and utilizing them for phylogenetic tree inference, by retrieving both ortho‐… read more here.
Keywords: gene tree; paralogues phylogenetic; enrichment data; gene ... See more keywords
Target Enrichment Approaches for Next-Generation Sequencing Applications in Oncology
Sign Up to like & getrecommendations! Published in 2022 at "Diagnostics"
DOI: 10.3390/diagnostics12071539
Abstract: Screening for genomic sequence variants in genes of predictive and prognostic significance is an integral part of precision medicine. Next-generation sequencing (NGS) technologies are progressively becoming platforms of choice to facilitate this, owing to their… read more here.
Keywords: oncology; next generation; target enrichment; enrichment approaches ... See more keywords
Target Enrichment Metagenomics Reveals Human Pegivirus-1 in Pediatric Hematopoietic Stem Cell Transplantation Recipients
Sign Up to like & getrecommendations! Published in 2022 at "Viruses"
DOI: 10.3390/v14040796
Abstract: Human pegivirus-1 (HPgV-1) is a lymphotropic human virus, typically considered nonpathogenic, but its infection can sometimes cause persistent viremia both in immunocompetent and immunosuppressed individuals. In a viral discovery research program in hematopoietic stem cell… read more here.
Keywords: stem cell; hematopoietic stem; stem; human pegivirus ... See more keywords