Octopus-toolkit: a workflow to automate mining of public epigenomic and transcriptomic next-generation sequencing data
Sign Up to like & getrecommendations! Published in 2018 at "Nucleic Acids Research"
DOI: 10.1093/nar/gky083
Abstract: Abstract Octopus-toolkit is a stand-alone application for retrieving and processing large sets of next-generation sequencing (NGS) data with a single step. Octopus-toolkit is an automated set-up-and-analysis pipeline utilizing the Aspera, SRA Toolkit, FastQC, Trimmomatic, HISAT2,… read more here.
Keywords: epigenomic transcriptomic; octopus toolkit; toolkit workflow; next generation ... See more keywords