Top-Down Crawl: a method for the ultra-rapid and motif-free alignment of sequences with associated binding metrics
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DOI: 10.1093/bioinformatics/btac653
Abstract: Abstract Summary Several high-throughput protein–DNA binding methods currently available produce highly reproducible measurements of binding affinity at the level of the k-mer. However, understanding where a k-mer is positioned along a binding site sequence depends… read more here.
Keywords: alignment; crawl method; ultra rapid; top crawl ... See more keywords