Articles with "transcriptome metabolome" as a keyword



Long‐term nanoplastics exposure contributes to impaired steroidogenesis by disrupting the hypothalamic‐testis axis: Evidence from integrated transcriptome and metabolome analysis

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Published in 2024 at "Journal of Applied Toxicology"

DOI: 10.1002/jat.4696

Abstract: Cumulative evidence suggested that nanoplastics (NPs) cause male toxicity, but the mechanisms of which are still misty. Steroidogenesis is a key biological event that responsible for maintaining reproductive health. However, whether dysregulated steroidogenesis is involved… read more here.

Keywords: steroidogenesis; nps; long term; transcriptome metabolome ... See more keywords

Integrative analysis of transcriptome and metabolome reveals probiotic effects on cecal metabolism in broilers.

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Published in 2022 at "Journal of the science of food and agriculture"

DOI: 10.1002/jsfa.12387

Abstract: BACKGROUND Probiotics play an important role in the host and have attracted widespread attention as an alternative to antibiotics. Arbor Acres broilers were used in the present experiment and fed different doses of compound probiotics… read more here.

Keywords: metabolism; metabolism broilers; analysis; cecal metabolism ... See more keywords

Tissue-specific transcriptome and metabolome analyses reveal a gene module regulating the terpenoid biosynthesis in Curcuma wenyujin

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Published in 2021 at "Industrial Crops and Products"

DOI: 10.1016/j.indcrop.2021.113758

Abstract: Abstract The volatile oil extracted from Curcuma wenyujin has various benefits for human health, which can be attributed to large amounts of bioactive terpenoids. Although more than 80 terpenoids have been reported from this species,… read more here.

Keywords: gene module; gene; curcuma wenyujin; transcriptome metabolome ... See more keywords

Transcriptome and metabolome profiling unveil the accumulation of flavonoids in Dendrobium officinale.

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Published in 2022 at "Genomics"

DOI: 10.1016/j.ygeno.2022.110324

Abstract: Dendrobium officinale is a Chinese herbal medicine with a long history of use in China. Flavonoids are known to be an important secondary metabolite in Dactilon officinale, but very little is known about their molecular… read more here.

Keywords: transcriptome metabolome; accumulation; metabolome profiling; profiling unveil ... See more keywords

Combined Analysis of Transcriptome and Metabolome Reveals the Potential Mechanism of the Enantioselective Effect of Chiral Penthiopyrad on Tomato Fruit Flavor Quality.

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Published in 2022 at "Journal of agricultural and food chemistry"

DOI: 10.1021/acs.jafc.2c03870

Abstract: This study investigated the enantioselective effects of S-, R-, and rac-penthiopyrad (PEN) on the flavor quality of tomato fruit through the levels of sugars, acids, volatiles, and nutrients and explored the potential mechanism by combined… read more here.

Keywords: tomato fruit; fruit; flavor quality; flavor ... See more keywords

Spatiotemporal transcriptome and metabolome landscapes of cotton fiber during initiation and early development

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Published in 2025 at "Nature Communications"

DOI: 10.1038/s41467-025-55869-z

Abstract: Cotton fibers are single cells that develop from the epidermal cells in the outer integument of developing seeds. The processes regulating fiber cell development have been extensively studied; however, the spatiotemporal transcriptome and metabolome profiles… read more here.

Keywords: transcriptome metabolome; cotton fiber; development; cotton ... See more keywords

Comparative transcriptome and metabolome profiling reveal molecular mechanisms underlying OsDRAP1-mediated salt tolerance in rice

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Published in 2021 at "Scientific Reports"

DOI: 10.1038/s41598-021-84638-3

Abstract: Integration of transcriptomics and metabolomics data can provide detailed information for better understanding the molecular mechanisms underlying salt tolerance in rice. In the present study, we report a comprehensive analysis of the transcriptome and metabolome… read more here.

Keywords: osdrap1 mediated; salt; tolerance; mediated salt ... See more keywords

Transcriptome and metabolome analysis revealed that phenylpropanoid and flavonoid biosynthesis respond to drought in tiger nut

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Published in 2025 at "Physiologia Plantarum"

DOI: 10.1111/ppl.70191

Abstract: Tiger nuts (Cyperus esculentus) have emerged as a novel oil crop, being utilized as raw materials for obtaining industrial ink. Drought is a serious stress that significantly affects the entire plant and reduces its yield.… read more here.

Keywords: drought; flavonoid biosynthesis; analysis; transcriptome metabolome ... See more keywords

Transcriptome and metabolome analyses of cold and darkness-induced pellicle cysts of Scrippsiella trochoidea

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Published in 2021 at "BMC Genomics"

DOI: 10.1186/s12864-021-07840-7

Abstract: Background Dinoflagellates are a group of unicellular organisms that are a major component of aquatic eukaryotes and important contributors to marine primary production. Nevertheless, many dinoflagellates are considered harmful algal bloom (HAB) species due to… read more here.

Keywords: darkness induced; cold darkness; transcriptome metabolome; pellicle cysts ... See more keywords

Comparative transcriptome and metabolome analyses provide new insights into the molecular mechanisms underlying taproot thickening in Panax notoginseng

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Published in 2019 at "BMC Plant Biology"

DOI: 10.1186/s12870-019-2067-5

Abstract: BackgroundTaproot thickening is a complex biological process that is dependent on the coordinated expression of genes controlled by both environmental and developmental factors. Panax notoginseng is an important Chinese medicinal herb that is characterized by… read more here.

Keywords: comparative transcriptome; panax notoginseng; transcriptome metabolome; taproot thickening ... See more keywords
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Transcriptome and metabolome reveal redirection of flavonoids in a white testa peanut mutant

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Published in 2020 at "BMC Plant Biology"

DOI: 10.1186/s12870-020-02383-7

Abstract: Background Coat color determines both appearance and nutrient quality of peanut. White seed coat in peanut can enhance the processing efficiency and quality of peanut oil. An integrative analysis of transcriptomes, metabolomes and histocytology was… read more here.

Keywords: seed; reveal redirection; metabolome reveal; transcriptome metabolome ... See more keywords