Combining transcriptomes and ultraconserved elements to illuminate the phylogeny of Apidae.
Sign Up to like & getrecommendations! Published in 2019 at "Molecular phylogenetics and evolution"
DOI: 10.1016/j.ympev.2018.10.012
Abstract: Two increasingly popular approaches to reconstruct the Tree of Life involve whole transcriptome sequencing and the target capture of ultraconserved elements (UCEs). Both methods can be used to generate large, multigene datasets for analysis of… read more here.
Keywords: elements illuminate; ultraconserved elements; combining transcriptomes; phylogeny apidae ... See more keywords
Comparing Ultraconserved Elements and Exons for Phylogenomic Analyses of Middle American Cichlids: When Data Agree to Disagree
Sign Up to like & getrecommendations! Published in 2021 at "Genome Biology and Evolution"
DOI: 10.1093/gbe/evab161
Abstract: Abstract Choosing among types of genomic markers to be used in a phylogenomic study can have a major influence on the cost, design, and results of a study. Yet few attempts have been made to… read more here.
Keywords: ultraconserved elements; phylogenomic analyses; genomic markers; elements exons ... See more keywords
A stable phylogenomic classification of Travunioidea (Arachnida, Opiliones, Laniatores) based on sequence capture of ultraconserved elements
Sign Up to like & getrecommendations! Published in 2018 at "ZooKeys"
DOI: 10.3897/zookeys.760.24937
Abstract: Abstract Molecular phylogenetics has transitioned into the phylogenomic era, with data derived from next-generation sequencing technologies allowing unprecedented phylogenetic resolution in all animal groups, including understudied invertebrate taxa. Within the most diverse harvestmen suborder, Laniatores,… read more here.
Keywords: classification; ultraconserved elements; stable phylogenomic; travunioidea ... See more keywords
Ultraconserved elements (UCEs) illuminate the population genomics of a recent, high-latitude avian speciation event
Sign Up to like & getrecommendations! Published in 2018 at "PeerJ"
DOI: 10.7717/peerj.5735
Abstract: Using a large, consistent set of loci shared by descent (orthologous) to study relationships among taxa would revolutionize among-lineage comparisons of divergence and speciation processes. Ultraconserved elements (UCEs), highly conserved regions of the genome, offer… read more here.
Keywords: ultraconserved elements; elements uces; divergence; population genomics ... See more keywords