To assemble or not to assemble: metagenomic profiling of microbially mediated biogeochemical pathways in complex communities
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DOI: 10.1093/bib/bbac594
Abstract: High-throughput profiling of microbial functional traits involved in various biogeochemical cycling pathways using shotgun metagenomic sequencing has been routinely applied in microbial ecology and environmental science. Multiple bioinformatics data processing approaches are available, including assembly-based… read more here.
Keywords: cycling; sample assembly; microbially mediated; mediated biogeochemical ... See more keywords