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Published in 2023 at "Ocular immunology and inflammation"
DOI: 10.1080/09273948.2023.2173243
Abstract: PURPOSE We establish an accurate and rapid diagnostic method for pathogen detection in infectious uveitis using nanopore metagenomic next-generation sequencing (NGS). METHODS In eight patients with suspected infectious uveitis, we prospectively compared the accuracy and…
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Keywords:
nanopore metagenomic;
pathogen detection;
using nanopore;
infectious uveitis ... See more keywords
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Published in 2021 at "Methods in Ecology and Evolution"
DOI: 10.1111/2041-210x.13561
Abstract: Metabarcoding has become a common approach to the rapid identification of the species composition in a mixed sample. The majority of studies use established short‐read high‐throughput sequencing platforms. The Oxford Nanopore MinIONTM, a portable sequencing…
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Keywords:
consensus;
workflow accurate;
nanopore minion;
accurate metabarcoding ... See more keywords
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Published in 2020 at "Journal of integrative plant biology"
DOI: 10.1111/jipb.13002
Abstract: N6 -methyladenosine (m6 A) is a prevalent modification in messenger RNAs and circular RNAs that plays important roles in regulating various aspects of RNA metabolism. However, the occurrence of the m6 A modification in plant…
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Keywords:
circular rnas;
using nanopore;
based direct;
rna ... See more keywords
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Published in 2022 at "Journal of Perinatal Medicine"
DOI: 10.1515/jpm-2022-0504
Abstract: Abstract Objectives Early diagnosis and treatment of intra-amniotic infection is crucial. Rapid pathogen identification allows for a definite diagnosis and enables proper management. We determined whether the 16S amplicon sequencing performed by a nanopore sequencing…
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Keywords:
amniotic infection;
intra amniotic;
diagnosis;
using nanopore ... See more keywords
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Published in 2022 at "Frontiers in Genetics"
DOI: 10.3389/fgene.2022.867018
Abstract: Occurrence of extra-chromosomal circular DNA is a phenomenon frequently observed in tumor cells, and the presence of such DNA has been recognized as a marker of adverse outcome across cancer types. We here describe a…
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Keywords:
circular dna;
dna;
dna fragments;
detection ... See more keywords
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Published in 2022 at "Frontiers in Immunology"
DOI: 10.3389/fimmu.2022.814806
Abstract: Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has rapidly spread and poses a major threat to public health worldwide. The whole genome sequencing plays a crucial role in virus surveillance and evolutionary analysis. In this…
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Keywords:
surveillance five;
genetic surveillance;
using nanopore;
nanopore sequencing ... See more keywords