SOMDE: A scalable method for identifying spatially variable genes with self-organizing map.
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DOI: 10.1093/bioinformatics/btab471
Abstract: MOTIVATION Recent developments of spatial transcriptomic sequencing technologies provide powerful tools for understanding cells in the physical context of tissue microenvironments. A fundamental task in spatial gene expression analysis is to identify genes with spatially… read more here.
Keywords: method identifying; spatially variable; variable genes; expression ... See more keywords