From Whole-Genome Shotgun Sequencing to Viral Community Profiling: The ViromeScan Tool.
Sign Up to like & getrecommendations! Published in 2018 at "Methods in molecular biology"
DOI: 10.1007/978-1-4939-7683-6_14
Abstract: ViromeScan is an innovative metagenomic analysis tool that allows the viral community characterization in terms of taxonomy from raw data of metagenomics sequencing. It efficiently denoises samples from reads of other microorganisms. Users can adopt… read more here.
Keywords: whole genome; genome shotgun; tool; shotgun sequencing ... See more keywords
Analysis of antibiotic usage for viral community-acquired pneumonia in adults
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DOI: 10.1007/s11684-019-0736-2
Abstract: The rationale for the antibiotic treatment of viral community-acquired pneumonia (CAP) in adults was analyzed to develop a clinical reference standard for this condition. Clinical data from 166 patients diagnosed with viral pneumonia across 14… read more here.
Keywords: use; viral community; community acquired; acquired pneumonia ... See more keywords
Viral Community Structure and Potential Functions in the Dried-Out Aral Sea Basin Change along a Desiccation Gradient
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DOI: 10.1128/msystems.00994-22
Abstract: Environmental viruses have added a wealth of knowledge to ecological studies with the emergence of metagenomic technology and approaches. They are also becoming recognized as important genetic repositories that underpin the functioning of terrestrial ecosystems… read more here.
Keywords: dried aral; aral sea; viral community; sea ... See more keywords
Environmental drivers of viral community composition in Antarctic soils identified by viromics
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DOI: 10.1186/s40168-017-0301-7
Abstract: BackgroundThe Antarctic continent is considered the coldest and driest place on earth with simple ecosystems, devoid of higher plants. Soils in the ice-free regions of Antarctica are known to harbor a wide range of microorganisms… read more here.
Keywords: drivers viral; environmental drivers; community; soil ... See more keywords