Articles with "virome" as a keyword



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Complex virome in feces from Amerindian children in isolated Amazonian villages

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Published in 2018 at "Nature Communications"

DOI: 10.1038/s41467-018-06502-9

Abstract: The number of viruses circulating in small isolated human populations may be reduced by viral extinctions and rare introductions. Here we used viral metagenomics to characterize the eukaryotic virome in feces from healthy children from… read more here.

Keywords: amazonian villages; isolated villages; amerindian children; virome feces ... See more keywords
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Longitudinal Investigation of Enteric Virome Signatures from Parental-Generation to Offspring Pigs

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Published in 2023 at "Microbiology Spectrum"

DOI: 10.1128/spectrum.00023-23

Abstract: This study shows that distinct stage-associated swine gut viromes may be determined by age and/or gut physiology at different growth stages, and enteric viruses probably manipulate carbohydrate decomposition by abundant glycoside hydrolases. These findings fill… read more here.

Keywords: swine gut; virome; offspring pigs; physiology ... See more keywords

A Diverse Virome Is Identified in Parasitic Flatworms of Domestic Animals in Xinjiang, China

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Published in 2023 at "Microbiology Spectrum"

DOI: 10.1128/spectrum.00702-23

Abstract: Characterizing the virome of parasites is important for unveiling the viral diversity, evolution, and ecology and will help to understand the “Russian doll” pattern among viruses, parasites, and host animals. Our data indicate that diverse… read more here.

Keywords: host animals; parasitic flatworms; ecology; virome ... See more keywords

A comprehensive reference catalog of human skin DNA virome reveals novel viral diversity and microenvironmental influences

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Published in 2025 at "Microbiology Spectrum"

DOI: 10.1128/spectrum.01178-25

Abstract: ABSTRACT Human skin serves as a dynamic habitat for a diverse microbiome, including a complex array of viruses whose diversity and roles are not fully understood. A total of 2,760 skin metagenomes from 6 published… read more here.

Keywords: human skin; viral diversity; catalog; skin ... See more keywords

Characterizations of the Gut Bacteriome, Mycobiome, and Virome in Patients with Osteoarthritis

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Published in 2022 at "Microbiology Spectrum"

DOI: 10.1128/spectrum.01711-22

Abstract: The gut microbiome of OA patients was completely altered compared to that in healthy individuals, including 279 differentially abundant bacterial species, 10 fungal species and 627 viral operational taxonomic units (vOTUs). Functional analysis of the… read more here.

Keywords: virome patients; virome; mycobiome virome; gut bacteriome ... See more keywords

The Chronic Wound Phageome: Phage Diversity and Associations with Wounds and Healing Outcomes

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Published in 2022 at "Microbiology Spectrum"

DOI: 10.1128/spectrum.02777-21

Abstract: Chronic wounds are an increasing medical burden. These wounds are known to be rich in microbial content, including both bacteria and bacterial viruses (phages). ABSTRACT Two leading impediments to chronic wound healing are polymicrobial infection… read more here.

Keywords: healing outcomes; virome; chronic wound; chronic wounds ... See more keywords

Fungal microbiome (mycobiome) and virome of the lacrimal sac in patients with PANDO: the lacriome paper 5

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Published in 2022 at "British Journal of Ophthalmology"

DOI: 10.1136/bjo-2022-322433

Abstract: Purpose To study the fungal microbiome (mycobiome) and the virome of the lacrimal sacs in patients with primary acquired nasolacrimal duct obstruction (PANDO). Methods A prospective study was performed on 10 consecutive samples of the… read more here.

Keywords: virome; lacrimal sac; fungal microbiome; patients pando ... See more keywords

Abstract B38: Virome assembly and annotation in brain tissue based on next-generation sequencing

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Published in 2020 at "Cancer Research"

DOI: 10.1158/1538-7445.mvc2020-b38

Abstract: Glioblastoma multiforme (GBM) is one of the most lethal brain tumors, and the virosphere in brain and its correlation with GBM triggering is controversy. The previous research in brain virosphere was mainly limited to the… read more here.

Keywords: assembly annotation; virome; virome assembly; brain ... See more keywords

A metagenomic investigation of the faecal RNA virome structure of asymptomatic chickens obtained from a commercial farm in Durban, KwaZulu-Natal province, South Africa

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Published in 2024 at "BMC Genomics"

DOI: 10.1186/s12864-024-10517-6

Abstract: Background Virome studies on birds, including chickens are relatively scarce, particularly from the African continent. Despite the continuous evolution of RNA viruses and severe losses recorded in poultry from seasonal viral outbreaks, the information on… read more here.

Keywords: farm; asymptomatic chickens; rna; diversity ... See more keywords

The altered gut virome community in rhesus monkeys is correlated with the gut bacterial microbiome and associated metabolites

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Published in 2019 at "Virology Journal"

DOI: 10.1186/s12985-019-1211-z

Abstract: BackgroundThe gut microbiome is closely associated with the health of the host; although the interaction between the bacterial microbiome and the whole virome has rarely been studied, it is likely of medical importance. Examination of… read more here.

Keywords: microbiome; gut bacterial; rhesus monkeys; virome ... See more keywords

Characterisation of the canine faecal virome in healthy dogs and dogs with acute diarrhoea using shotgun metagenomics

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Published in 2017 at "PLoS ONE"

DOI: 10.1371/journal.pone.0178433

Abstract: The virome has been increasingly investigated in numerous animal species and in different sites of the body, facilitating the identification and discovery of a variety of viruses. In spite of this, the faecal virome of… read more here.

Keywords: dogs acute; faecal virome; virome healthy; acute diarrhoea ... See more keywords