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   Articles with "web application" as a keyword



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SELYMATRA: A Web Application for Protein Profiling Analysis of Mass Spectra.

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recommendations! Published in 2021 at "Biotechnology and applied biochemistry"

DOI: 10.1002/bab.2249

Abstract: Surface Enhanced Laser Desorption/Ionization-Time Of Flight (SELDI-TOF) Mass Spectrometry is a variant of the MALDI. It is used in many cases especially for the analysis of protein profiling and for preliminary screening of biomarkers in… read more here.

Keywords: mass spectra; mass; analysis mass; web application ... See more keywords

PSSKB: A Web Application to Study Protein Structures

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recommendations! Published in 2025 at "Journal of Computational Chemistry"

DOI: 10.1002/jcc.70046

Abstract: The proteins expressed during the cell cycle determine cell function and ensure signaling pathway activation in response to environmental influences. Developments in structural biology, biophysics, and bioinformatics provide information on the structure and function of… read more here.

Keywords: web application; application study; structure; protein ... See more keywords

DIGEP‐Pred 2.0: A web application for predicting drug‐induced cell signaling and gene expression changes

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recommendations! Published in 2024 at "Molecular Informatics"

DOI: 10.1002/minf.202400032

Abstract: The analysis of drug‐induced gene expression profiles (DIGEP) is widely used to estimate the potential therapeutic and adverse drug effects as well as the molecular mechanisms of drug action. However, the corresponding experimental data is… read more here.

Keywords: web application; gene expression; digep pred; drug ... See more keywords

FREDA: A Web Application for the Processing, Analysis, and Visualization of Fourier‐Transform Mass Spectrometry Data

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recommendations! Published in 2024 at "Rapid Communications in Mass Spectrometry"

DOI: 10.1002/rcm.9980

Abstract: ABSTRACT Rationale The high‐resolution measurement capability of Fourier‐transform mass spectrometry (FT‐MS) has made it a necessity for exploring the molecular composition of complex organic mixtures, like soil, plant, aquatic, and petroleum samples. This demand has… read more here.

Keywords: web application; mass spectrometry; analysis; freda ... See more keywords

Web Application for Quantification of Traumatic Brain Injury-Induced Cortical Lesions in Adult Mice

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recommendations! Published in 2019 at "Neuroinformatics"

DOI: 10.1007/s12021-019-09444-9

Abstract: Disabilities resulting from traumatic brain injury (TBI) strongly correlate with the cytoarchitectonic part of the brain damaged, lesion area, and type of lesion. We developed a Web application to estimate the location of the lesion… read more here.

Keywords: method; application; web application; injury ... See more keywords

Analysis of Web Application Code Vulnerabilities using Secure Coding Standards

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recommendations! Published in 2017 at "Arabian Journal for Science and Engineering"

DOI: 10.1007/s13369-016-2362-5

Abstract: The evolution of modern web application involves a broad range of web technologies such as ActiveX, JavaScript and CGI. It mitigates the demand of bolt-on security services, but remains suffered from code vulnerabilities. Two common… read more here.

Keywords: web application; code vulnerabilities; secure coding; code ... See more keywords

DistAA: Database of amino acid distances in proteins and web application for statistical review of distances

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recommendations! Published in 2019 at "Computational biology and chemistry"

DOI: 10.1016/j.compbiolchem.2019.107130

Abstract: Three-dimensional structure of a protein chain is determined by its amino acid interactions. One approach to the analysis of amino acid interactions refers to geometric distances of amino acid pairs in polypeptide chains. For a… read more here.

Keywords: web application; acid distances; amino; amino acid ... See more keywords
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Building bridges between global information systems on marine organisms and ecosystem models

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recommendations! Published in 2019 at "Ecological Modelling"

DOI: 10.1016/j.ecolmodel.2019.01.023

Abstract: To facilitate the wider implementation of ecosystem modeling platforms and, thereby, to help advance ecosystem-based fisheries management (EBFM) worldwide, tools delivering a large quantity of inputs to ecosystem models are needed. We developed a web… read more here.

Keywords: ecosystem; web application; information systems; ecosystem models ... See more keywords

A web application for analysis of heat transfer through building walls and calculation of optimal insulation thickness

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recommendations! Published in 2020 at "Energy Reports"

DOI: 10.1016/j.egyr.2020.08.055

Abstract: Abstract Controlling heat transfer and managing heat flows in a building has become very important in recent years and is essential to ensure the thermal comfort of occupants, increase energy efficiency, and sustainable development. These… read more here.

Keywords: insulation; wall; web application; heat transfer ... See more keywords

Automated analysis of common errors in L2 learner production: Prototype web application development

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recommendations! Published in 2025 at "Studies in Second Language Acquisition"

DOI: 10.1017/s0272263125100934

Abstract: Abstract This research report presents the development and validation of Auto Error Analyzer, a prototype web application designed to automate the calculation of accuracy and its related metrics for measuring second language (L2) production. Building… read more here.

Keywords: web application; error analyzer; language; auto error ... See more keywords

PlayMolecule ProteinPrepare: A Web Application for Protein Preparation for Molecular Dynamics Simulations.

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recommendations! Published in 2017 at "Journal of chemical information and modeling"

DOI: 10.1021/acs.jcim.7b00190

Abstract: Protein preparation is a critical step in molecular simulations that consists of refining a Protein Data Bank (PDB) structure by assigning titration states and optimizing the hydrogen-bonding network. In this application note, we describe ProteinPrepare,… read more here.

Keywords: protein; proteinprepare web; web application; protein preparation ... See more keywords