MOSAIC: a web-interface for statistical analyses in ecotoxicology
Sign Up to like & getrecommendations! Published in 2017 at "Environmental Science and Pollution Research"
DOI: 10.1007/s11356-017-9809-4
Abstract: In ecotoxicology, bioassays are standardly conducted in order to measure acute or chronic effects of potentially toxic substances on reproduction, growth, and/or survival of living animals. MOSAIC, standing for MOdeling and StAtistical tools for ecotoxICology,… read more here.
Keywords: statistical analyses; mosaic web; web interface; interface statistical ... See more keywords
PrimaDORAC: A Free Web Interface for the Assignment of Partial Charges, Chemical Topology, and Bonded Parameters in Organic or Drug Molecules.
Sign Up to like & getrecommendations! Published in 2017 at "Journal of chemical information and modeling"
DOI: 10.1021/acs.jcim.7b00145
Abstract: We present PrimaDORAC, a simple and freely accessible web interface for generating the topology and the parameter files of organic or drug molecules to be used in molecular mechanics or molecular dynamics calculations. The interface… read more here.
Keywords: organic drug; web interface; topology; drug molecules ... See more keywords
PhastWeb: a web interface for evolutionary conservation scoring of multiple sequence alignments using phastCons and phyloP
Sign Up to like & getrecommendations! Published in 2019 at "Bioinformatics"
DOI: 10.1093/bioinformatics/bty966
Abstract: Summary The Phylogenetic Analysis with Space/Time models (PHAST) package is a widely used software package for comparative genomics that has been freely available for download since 2002. Here we introduce a web interface (phastWeb) that… read more here.
Keywords: phastweb web; web interface; conservation; phastcons phylop ... See more keywords
Drug Targetor: a web interface to investigate the human druggome for over 500 phenotypes
Sign Up to like & getrecommendations! Published in 2019 at "Bioinformatics"
DOI: 10.1093/bioinformatics/bty982
Abstract: Abstract Summary Results from hundreds of genome-wide association studies (GWAS) are now freely available and offer a catalogue of the association between phenotypes across medicine with variants in the genome. With the aim of using… read more here.
Keywords: web interface; targetor web; drug; drug target ... See more keywords
VFDB 2019: a comparative pathogenomic platform with an interactive web interface
Sign Up to like & getrecommendations! Published in 2019 at "Nucleic Acids Research"
DOI: 10.1093/nar/gky1080
Abstract: Abstract The virulence factor database (VFDB, http://www.mgc.ac.cn/VFs/) is devoted to providing the scientific community with a comprehensive warehouse and online platform for deciphering bacterial pathogenesis. The various combinations, organizations and expressions of virulence factors (VFs)… read more here.
Keywords: interactive web; web interface; comparative pathogenomic; vfdb ... See more keywords
Patscanui: an intuitive web interface for searching patterns in DNA and protein data
Sign Up to like & getrecommendations! Published in 2018 at "Nucleic Acids Research"
DOI: 10.1093/nar/gky321
Abstract: Abstract Patterns in biological sequences frequently signify interesting features in the underlying molecule. Many tools exist to search for well-known patterns. Less support is available for exploratory analysis, where no well-defined patterns are known yet.… read more here.
Keywords: web interface; intuitive web; patscanui intuitive; interface ... See more keywords
RiceMetaSys for salt and drought stress responsive genes in rice: a web interface for crop improvement
Sign Up to like & getrecommendations! Published in 2017 at "BMC Bioinformatics"
DOI: 10.1186/s12859-017-1846-y
Abstract: BackgroundGenome-wide microarray has enabled development of robust databases for functional genomics studies in rice. However, such databases do not directly cater to the needs of breeders. Here, we have attempted to develop a web interface… read more here.
Keywords: web interface; stress; crop improvement; crop ... See more keywords
MOPSMAP v1.0: a versatile tool for the modeling of aerosol optical properties
Sign Up to like & getrecommendations! Published in 2018 at "Geoscientific Model Development"
DOI: 10.5194/gmd-11-2739-2018
Abstract: Abstract. The spatiotemporal distribution and characterization of aerosol particles are usually determined by remote-sensing and optical in situ measurements. These measurements are indirect with respect to microphysical properties, and thus inversion techniques are required to… read more here.
Keywords: web interface; optical properties; aerosol particles; mopsmap versatile ... See more keywords