Genome-Wide Identification of Chromatin Domains Anchored at the Nuclear Periphery in Plants.
Sign Up to like & getrecommendations! Published in 2018 at "Methods in molecular biology"
DOI: 10.1007/978-1-4939-8657-6_23
Abstract: As a functional compartment, the nuclear periphery plays critical roles in regulating the spatial organization of chromatin in the nuclei and gene expression. Generally, the nuclear periphery is a transcriptionally repressed compartment enriched for silenced… read more here.
Keywords: genome wide; wide identification; chromatin; nuclear periphery ... See more keywords
Genome-wide identification and comparative analysis of alternative splicing across four legume species
Sign Up to like & getrecommendations! Published in 2018 at "Planta"
DOI: 10.1007/s00425-018-03073-3
Abstract: Main conclusionAlternative splicing EVENTS were genome-wide identified for four legume species, and nitrogen fixation-related gene families and evolutionary analysis was also performed.Alternative splicing (AS) is a key regulatory mechanism that contributes to transcriptome and proteome… read more here.
Keywords: four legume; genome wide; wide identification; analysis ... See more keywords
Genome-Wide Identification of Drought Response Genes in Soybean Seedlings and Development of Biomarkers for Early Diagnoses
Sign Up to like & getrecommendations! Published in 2018 at "Plant Molecular Biology Reporter"
DOI: 10.1007/s11105-018-1085-z
Abstract: Drought is a yield-limiting factor for soybean (Glycine max L. Merrill) production in North America. Understanding molecular mechanisms underlying early responses of the soybean plant to drought may help develop new techniques to manage the… read more here.
Keywords: genome wide; wide identification; biomarkers early; plant ... See more keywords
Transcriptome-wide identification of indole glucosinolate dependent flg22-response genes in Arabidopsis.
Sign Up to like & getrecommendations! Published in 2019 at "Biochemical and biophysical research communications"
DOI: 10.1016/j.bbrc.2019.09.110
Abstract: Indole glucosinolates are known to play essential and diverse roles in Arabidopsis immunity to pathogens. However, a complete understanding of the function of these compounds in plant immunity remains unclear. In this study, we investigated… read more here.
Keywords: wide identification; myb51; immunity; identification indole ... See more keywords
Genome-wide identification and analysis of prognostic features in human cancers.
Sign Up to like & getrecommendations! Published in 2022 at "Cell reports"
DOI: 10.1016/j.celrep.2022.110569
Abstract: Clinical decisions in cancer rely on precisely assessing patient risk. To improve our ability to identify the most aggressive malignancies, we constructed genome-wide survival models using gene expression, copy number, methylation, and mutation data from… read more here.
Keywords: cancer; analysis; wide identification; analysis prognostic ... See more keywords
Genome-wide identification and prediction of SARS-CoV-2 mutations show an abundance of variants: Integrated study of bioinformatics and deep neural learning
Sign Up to like & getrecommendations! Published in 2021 at "Informatics in Medicine Unlocked"
DOI: 10.1016/j.imu.2021.100798
Abstract: Genomic data analysis is a fundamental system for monitoring pathogen evolution and the outbreak of infectious diseases. Based on bioinformatics and deep learning, this study was designed to identify the genomic variability of SARS-CoV-2 worldwide… read more here.
Keywords: genome wide; wide identification; analysis; study ... See more keywords
Transcriptome-wide Identification and Validation of Interactions between the miRNA Machinery and HuR on mRNA Targets.
Sign Up to like & getrecommendations! Published in 2018 at "Journal of molecular biology"
DOI: 10.1016/j.jmb.2017.12.006
Abstract: The 3' untranslated region (UTR) of mRNAs is the primary regulatory region that mediates post-transcriptional control by microRNAs and RNA-binding proteins in the cytoplasm. Aside from individual sequence-specific binding and regulation, examples of interaction between… read more here.
Keywords: wide identification; identification validation; hur; validation interactions ... See more keywords
Genome-wide identification of miRNAs and target regulatory network in the invasive ectoparasitic mite Varroa destructor.
Sign Up to like & getrecommendations! Published in 2021 at "Genomics"
DOI: 10.1016/j.ygeno.2021.05.028
Abstract: Varroa destructor is an ectoparasite mite that attacks bees leading to colony disorders worldwide. microRNAs (miRNAs) are key molecules used by eukaryotes to post-transcriptional control of gene expression. Nevertheless, still lack information about V. destructor… read more here.
Keywords: genome wide; wide identification; varroa destructor; destructor ... See more keywords
Genome-wide identification and characterization of phased small interfering RNA genes in response to Botrytis cinerea infection in Solanum lycopersicum
Sign Up to like & getrecommendations! Published in 2017 at "Scientific Reports"
DOI: 10.1038/s41598-017-02233-x
Abstract: Phased small interfering RNAs (phasiRNAs) are encoded by a novel class of genes known as phasiRNA producing (PHAS) genes. These genes play important regulatory roles by targeting protein coding transcripts in plant species. In this… read more here.
Keywords: genome wide; wide identification; small interfering; characterization phased ... See more keywords
Proteome-wide identification and functional analysis of ubiquitinated proteins in peach leaves
Sign Up to like & getrecommendations! Published in 2020 at "Scientific Reports"
DOI: 10.1038/s41598-020-59342-3
Abstract: Ubiquitination is a critical post-translational modification machinery that governs a wide range of cellular functions by regulating protein homeostasis. Identification of ubiquitinated proteins and lysine residues can help researchers better understand the physiological roles of… read more here.
Keywords: wide identification; ubiquitinated proteins; analysis; proteome wide ... See more keywords
Genome-wide identification and characterization of perirenal adipose tissue microRNAs in rabbits fed a high-fat diet
Sign Up to like & getrecommendations! Published in 2021 at "Bioscience Reports"
DOI: 10.1042/bsr20204297
Abstract: Abstract MicroRNAs (miRNAs) are a class of endogenous single-stranded RNA molecules that play an important role in gene regulation in animals by pairing with target gene mRNA. Extensive evidence shows that miRNAs are key players… read more here.
Keywords: wide identification; high fat; fat diet; genome wide ... See more keywords